HOXC11

HOXC11
Identifiers
Aliases	HOXC11,HOX3H, homeobox C11
External IDs	OMIM:605559;MGI:96193;HomoloGene:130362;GeneCards:HOXC11;OMA:HOXC11 - orthologs
Gene location (Human) Chr. Chromosome 12 (human) Band 12q13.13 Start 53,973,126bp End 53,977,643bp
Gene location (Mouse) Chr. Chromosome 15 (mouse) Band 15 F3|15 58.02 cM Start 102,862,862bp End 102,866,143bp
RNA expressionpattern Bgee Human Mouse(ortholog) Top expressed in testicle skin of leg popliteal artery tibial arteries skin of abdomen saphenous vein muscle of lower limb muscle of leg gastrocnemius muscle subcutaneous adipose tissue Top expressed in tail of embryo paramesonephric duct male urethra muscle tissue skeletal muscle tissue muscle of thigh genital tubercle quadriceps femoris muscle embryo mesonephric duct More reference expression data BioGPS More reference expression data
Gene ontology Molecular function RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA binding sequence-specific DNA binding DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific Cellular component nucleus nucleoplasm cytosol Biological process multicellular organism development embryonic skeletal joint morphogenesis skeletal system development proximal/distal pattern formation embryonic digit morphogenesis endoderm development metanephros development regulation of transcription, DNA-templated organ induction anterior/posterior pattern specification positive regulation of transcription by RNA polymerase II transcription, DNA-templated transcription by RNA polymerase II Sources:Amigo/QuickGO
Orthologs Species Human Mouse Entrez 3227 109663 Ensembl ENSG00000123388 ENSMUSG00000001656 UniProt O43248 P31313 RefSeq (mRNA) NM_014212 NM_001024842 RefSeq (protein) NP_055027 NP_001020013 Location (UCSC) Chr 12: 53.97 – 53.98 Mb Chr 15: 102.86 – 102.87 Mb PubMedsearch
Wikidata
View/Edit Human View/Edit Mouse

Homeobox protein Hox-C11is aproteinthat in humans is encoded by theHOXC11gene.

This gene belongs to thehomeoboxfamily of genes. The homeobox genes encode a highly conserved family oftranscription factorsthat play an important role inmorphogenesisin all multicellular organisms.

Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, which are located on differentchromosomesand consist of 9 to 11 genes arranged in tandem. This gene is one of several homeobox HOXC genes located in a cluster onchromosome 12.The product of this gene binds to a promoter element of thelactase-phlorizin hydrolase.It also may play a role in earlyintestinaldevelopment. An alternatively spliced variant encoding a shorterisoformhas been described but its full-length nature has not been determined.

Further reading

• Acampora D, D'Esposito M, Faiella A, et al. (1990)."The human HOX gene family".Nucleic Acids Res.17(24): 10385–10402.doi:10.1093/nar/17.24.10385.PMC335308.PMID2574852.
• Rabin M, Ferguson-Smith A, Hart CP, Ruddle FH (1987)."Cognate homeo-box loci mapped on homologous human and mouse chromosomes".Proc. Natl. Acad. Sci. U.S.A.83(23): 9104–9108.Bibcode:1986PNAS...83.9104R.doi:10.1073/pnas.83.23.9104.PMC387083.PMID2878432.
• Apiou F, Flagiello D, Cillo C, et al. (1996). "Fine mapping of human HOX gene clusters".Cytogenet. Cell Genet.73(1–2): 114–115.doi:10.1159/000134320.PMID8646877.
• Flagiello D, Gibaud A, Dutrillaux B, et al. (1997). "Distinct patterns of all-trans retinoic acid dependent expression of HOXB and HOXC homeogenes in human embryonal and small-cell lung carcinoma cell lines".FEBS Lett.415(3): 263–267.Bibcode:1997FEBSL.415..263F.doi:10.1016/S0014-5793(97)01118-6.PMID9357979.S2CID26075369.
• Mitchelmore C, Troelsen JT, Sjöström H, Norén O (1998)."The HOXC11 homeodomain protein interacts with the lactase-phlorizin hydrolase promoter and stimulates HNF1 Alpha -dependent transcription".J. Biol. Chem.273(21): 13297–13306.doi:10.1074/jbc.273.21.13297.PMID9582375.
• Kosaki K, Kosaki R, Suzuki T, et al. (2002). "Complete mutation analysis panel of the 39 human HOX genes".Teratology.65(2): 50–62.doi:10.1002/tera.10009.PMID11857506.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003)."Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences".Proc. Natl. Acad. Sci. U.S.A.99(26): 16899–16903.Bibcode:2002PNAS...9916899M.doi:10.1073/pnas.242603899.PMC139241.PMID12477932.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004)."The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)".Genome Res.14(10B): 2121–2127.doi:10.1101/gr.2596504.PMC528928.PMID15489334.
• Zhang X, Hamada J, Nishimoto A, et al. (2007)."HOXC6 and HOXC11 increase transcription of S100beta gene in BrdU-induced in vitro differentiation of GOTO neuroblastoma cells into Schwannian cells".J. Cell. Mol. Med.11(2): 299–306.doi:10.1111/j.1582-4934.2007.00020.x.PMC3822828.PMID17488478.

External links

• HOXC11+protein,+humanat the U.S. National Library of MedicineMedical Subject Headings(MeSH)

This article incorporates text from theUnited States National Library of Medicine,which is in thepublic domain.