Python library to handle Gene Ontology (GO) terms

Deep functional residue identification

Source ontology files for the Gene Ontology

Schema and generated objects for biolink data model and upper ontology

[ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding

python library for working with ontologies and ontology associations

Bio4j abstract model and general entry point to the project

GO enrichment with python -- pandas meets networkx

Function prediction using a deep ontology-aware classifier

📚 Biomedical knowledge mining using GOSemSim and clusterProfiler

Basic and Advanced OBO Graphs: specification and reference implementation

⛳ GO-terms Semantic Similarity Measures

Material for GO OWL/Protege Tutorial

A collection of metadata, tools, and files associated with the Gene Ontology public web presence.

A standalone interactive application for detecting biological significance on a set of genes

Transcripts annotation and GO enrichment Fisher tests

ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps

GeneSCF moved to a dedicated GitHub page,https://github.com/genescf/GeneSCF

Gene ontology (GO) semantic similarity library for Python

The Gene Ontology Helpdesk