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1. MMseqs2 MMseqs2Public

   MMseqs2: ultra fast and sensitive search and clustering suite

   C 1.4k 195

2. hh-suite hh-suitePublic

   Remote protein homology detection suite.

   C 535 133

3. WIsH WIsHPublic

   Predict prokaryotic host for phage metagenomic sequences

   C++ 51 10

4. BaMMmotif2 BaMMmotif2Public

   Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs as modelled by higher-order Markov models.

   C++ 12 5

5. PEnG-motif PEnG-motifPublic

   PEnG-motif is an open-source software package for searching statistically overrepresented motifs (position specific weight matrices, PWMs) in a set of DNA sequences.

   C++ 8 3

6. b-lore b-lorePublic

   Bayesian multiple logistic regression for GWAS meta-analysis

   Python 16 1